Max Planck Institute for Molecular Genetics - Ihnestraße 63-73 - 14195 Berlin - Germany - Phone: (+49 30) 8413 1150 - Fax: (+49 30) 8413 1394

Projekt "Evolution von Proteinkomplexen"

Termine

Vorbesprechung

Nächste Besprechungen am Donnerstag, den 19. März.

Begleitseminar

Groupmeeting

Literatur

• Tracing the evolution of a large protein complex in the eukaryotes, NADH:ubiquinone oxidoreductase (Complex I).
  Gabaldón T, Rainey D, Huynen MA.
  J Mol Biol. 2005 May 13;348(4):857-70.
  (Max Homilius)
• Complex fate of paralogs.
  Szklarczyk R, Huynen MA, Snel B.
  BMC Evol Biol. 2008 Dec 18;8:337.
  (Yuk-Shan Heung)
• The ins and outs of ATP-dependent chromatin remodeling in budding yeast: biophysical and proteomic perspectives.
  van Vugt JJ, Ranes M, Campsteijn C, Logie C.
  Biochim Biophys Acta. 2007 Mar;1769(3):153-71
  (Ivan Kel)
• Age-dependent evolution of the yeast protein interaction network suggests a limited role of gene duplication and divergence.
  Kim WK, Marcotte EM.
  PLoS Comput Biol. 2008 Nov;4(11):e1000232.
  (Christoph Standfuss)
• Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment.
  Shevchenko A, Roguev A, Schaft D, Buchanan L, Habermann B, Sakalar C, Thomas H, Krogan NJ, Shevchenko A, Stewart AF.
  Genome Biol. 2008;9(11):R167. (Sebastian Thieme)
• Fission yeast SWI/SNF and RSC complexes show compositional and functional differences from budding yeast.
  Monahan BJ, Villén J, Marguerat S, Bähler J, Gygi SP, Winston F.
  Nat Struct Mol Biol. 2008 Aug;15(8):873-80. (Sebastian Thieme)
• Reconstructing Domain Compositions of Ancestral Multi-domain Proteins
  Behshad Behzadi and Martin Vingron, RECOMB-CG 2006, LNBI 4205 (John Wiedenhoeft)
• Proteome survey reveals modularity of the yeast cell machinery.
  Gavin AC et al.Nature. 2006 Mar 30;440(7084):631-6.
• Global landscape of protein complexes in the yeast Saccharomyces cerevisiae.
Krogan NJ et al. Nature. 2006 Mar 30;440(7084):637-43.

Resourcen

• The recommended Python-Tutorial
• SCons, ein Build-Tool, das wir verwenden sollten.

Betreuer

• Dr. Roland Krause
  (krause@molgen.mpg.de)
Last update 2009-01-30